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Metagenomic polymorphic toxin effector and immunity profiling predicts microbiome development and disease-related dysbiosis

  • Hunter W. Schroer
  • , Francesco Beghini
  • , Juan Antonio Raygoza Garay
  • , Nicholas A. Christakis
  • , Dustin E. Bosch
  • Yale Institute for Network Science
  • University of Iowa
  • Yale University

Research output: Contribution to journalArticlepeer-review

Original languageEnglish
JournalmSystems
Volume11
Issue number6
DOIs
StatePublished - Jan 2026

ASJC Scopus Subject Areas

  • Microbiology
  • Ecology, Evolution, Behavior and Systematics
  • Physiology
  • Biochemistry
  • Modeling and Simulation
  • Molecular Biology
  • Genetics
  • Computer Science Applications

Keywords

  • gut microbial ecology
  • machine learning
  • non-genetic inheritance
  • toxin secretion system
  • vertical transmission

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